2017
Armijo, G., & Gutiérrez, R. A. (2017). Emerging players in the nitrate signaling pathway. Mol. Plant. In press.
Canales, J. Contreras-Lopez, O. Alvarez, J. M. Gutierrez, R. (2017). Nitrate control of root hair initiation is mediated by NRT1.1-TGA1/4 and root hair development genes in Arabidopsis thaliana. Plant J. In press.
Agurto, M., Schlechter, R. O., Armijo, G., Solano, E., Serrano, C., Contreras, R. A., Zúñiga, G. E., & Arce-Johnson, P. (2017). RUN1 and REN1 Pyramiding in Grapevine (Vitis vinifera cv. Crimson Seedless) Displays an Improved Defense Response Leading to Enhanced Resistance to Powdery Mildew (Erysiphe necator). Front. Plant Sci., 8, 758 HTML
Czemmel, S., Höll, J., Loyola, R., Arce-Johnson, P., Alcalde, J. A., Matus, J. T., & Bogs, J. (2017). Transcriptome-Wide Identification of Novel UV-B- and Light Modulated Flavonol Pathway Genes Controlled by VviMYBF1. Front. Plant Sci., 8, 1084 HTML
Matus, J. T., Cavallini, E., Loyola, R., Höll, J., Finezzo, L., Dal Santo, S., Vialet, S., Commisso, M., Roman, F., Schubert, A., Alcalde, J. A., Bogs, J., Ageorges, A., Tornielli, G. B., & Arce-Johnson, P. (2017). A group of grapevine MYBA transcription factors located in chromosome 14 control anthocyanin synthesis in vegetative organs with different specificities compared with the berry color locus. Plant J., 91(2), 220–236 HTML
Restovic, F., Espinoza-Corral, R., Gómez, I., Vicente-Carbajosa, J., & Jordana, X. (2017). An active Mitochondrial Complex II Present in Mature Seeds Contains an Embryo-Specific Iron-Sulfur Subunit Regulated by ABA and bZIP53 and Is Involved in Germination and Seedling Establishment. Front. Plant Sci., 8, 277 HTML
Timmermann, T., Armijo, G., Donoso, R., Seguel, A., Holuigue, L., & González, B. (2017). Paraburkholderia phytofirmans PsJN Protects Arabidopsis thaliana Against a Virulent Strain of Pseudomonas syringae Through the Activation of Induced Resistance. Mol. Plant. Microbe. Interact., 30(3), 215–230 HTML
Zúñiga, A., Donoso, R. A., Ruiz, D., Ruz, G. A., & González, B. (2017). Quorum-Sensing Systems in the Plant Growth-Promoting Bacterium Paraburkholderia phytofirmans PsJN Exhibit Cross-Regulation and Are Involved in Biofilm Formation. Mol. Plant. Microbe. Interact., 30 (7), 557–565 HTML
Nuñez, I. N., Matute, T. F., Del Valle, I. D., Kan, A., Choksi, A., Endy, D., Haseloff, J., Rudge, T. J., & Federici, F. (2017). Artificial Symmetry-Breaking for Morphogenetic Engineering Bacterial Colonies. ACS Synth. Biol., 6(2), 256–265 HTML
Pastenes, L., Valdivieso, C., Di Genova, A., Travisany, D., Hart, A., Montecino, M., Orellana, A., Gonzalez, M., Gutiérrez, R. A., Allende, M. L., Maass, A., & Méndez, M. A. (2017). Global gene expression analysis provides insight into local adaptation to geothermal streams in tadpoles of the Andean toad Rhinella spinulosa. Sci. Rep., 7(1), 1966 HTML
Puelma, T., Araus, V., Canales, J., Vidal, E. A., Cabello, J. M., Soto, A., & Gutiérrez, R. A. (2017). GENIUS: web server to predict local gene networks and key genes for biological functions. Bioinformatics, 33(5), 760–761 HTML
Undurraga, S. F., Ibarra-Henríquez, C., Fredes, I., Álvarez, J. M., & Gutiérrez, R. A. (2017). Nitrate signaling and early responses in Arabidopsis roots. J. Exp. Bot., 68(10), 2541–2551 HTML
2016
Acuña, M., Martínez, P., Moraga, C., He, X., Moraga, M., Hunter, B., Nuernberg, P., Gutiérrez, R. A., González, M., Schuchman, E. H., Santos, J. L., Miquel, J. F., Mabe, P., & Zanlungo, S. (2016). Epidemiological, clinical and biochemical characterization of the p.(Ala359Asp) SMPD1 variant causing Niemann-Pick disease type B. Eur. J. Hum. Genet., 24(2), 208–13 HTML
Araus, V., Vidal, E. A., Puelma, T., Alamos, S., Mieulet, D., Guiderdoni, E., & Gutiérrez, R. A. (2016). Members of BTB Gene Family of Scaffold Proteins Suppress Nitrate Uptake and Nitrogen Use Efficiency. Plant Physiol., 171(2), 1523–32 HTML
Armijo, G., Espinoza, C., Loyola, R., Restovic, F., Santibáñez, C., Schlechter, R., Agurto, M., & Arce-Johnson, P. (2016). Grapevine Biotechnology: Molecular Approaches Underlying Abiotic and Biotic Stress Responses. In Grape and Wine Biotechnology. InTech HTML
Armijo, G., Schlechter, R., Agurto, M., Muñoz, D., Nuñez, C., & Arce-Johnson, P. (2016). Grapevine Pathogenic Microorganisms: Understanding Infection Strategies and Host Response Scenarios. Front. Plant Sci., 7(March), 382 HTML
Donoso, R., Leiva-Novoa, P., Zúñiga, A., Timmermann, T., Recabarren-Gajardo, G., & González, B. (2016). Biochemical and genetic basis of indole-3-acetic acid (auxin phytohormone) degradation by the plant growth promoting rhizobacterium Paraburkholderia phytofirmans PsJN. Appl. Environ. Microbiol., AEM.01991-16 HTML
Erpel, F., Restovic, F., & Arce-Johnson, P. (2016). Development of phytase-expressing Chlamydomonas reinhardtii for monogastric animal nutrition. BMC Biotechnol., 16(1), 29 HTML
Inostroza-Blancheteau, C., Acevedo, P., Loyola, R., Arce-Johnson, P., Alberdi, M., & Reyes-Díaz, M. (2016). Short-term UV-B radiation affects photosynthetic performance and antioxidant gene expression in highbush blueberry leaves. Plant Physiol. Biochem. PPB, 107, 301–9 HTML
Kühn, N., Serrano, A., Abello, C., Arce, A., Espinoza, C., Gouthu, S., Deluc, L., & Arce-Johnson, P. (2016). Regulation of polar auxin transport in grapevine fruitlets (Vitis vinifera L.) and the proposed role of auxin homeostasis during fruit abscission. BMC Plant Biol., 16(1), 234 HTML
Ledger, T., Rojas, S., Timmermann, T., Pinedo, I., Poupin, M. J., Garrido, T., Richter, P., Tamayo, J., & Donoso, R. (2016). Volatile-Mediated Effects Predominate in Paraburkholderia phytofirmans Growth Promotion and Salt Stress Tolerance of Arabidopsis thaliana. Front. Microbiol., 7, 1838 HTML
Loyola, R., Herrera, D., Mas, A., Wong, D. C. J., Höll, J., Cavallini, E., Amato, A., Azuma, A., Ziegler, T., Aquea, F., Castellarin, S. D., Bogs, J., Tornielli, G. B., Peña-Neira, A., Czemmel, S., Alcalde, J. A., Matus, J. T., & Arce-Johnson, P. (2016). The photomorphogenic factors UV-B RECEPTOR 1, ELONGATED HYPOCOTYL 5, and HY5 HOMOLOGUE are part of the UV-B signalling pathway in grapevine and mediate flavonol accumulation in response to the environment. J. Exp. Bot., 67(18), 5429–5445 HTML
Lu, H., Greenberg, J. T., & Holuigue, L. (2016). Editorial: Salicylic Acid Signaling Networks. Front. Plant Sci., 7(1), 52–4 HTML
Meyer-Regueiro, C., Schlechter, R., Espinoza, C., Bisquertt, A., Aquea, F., & Arce-Johnson, P. (2016). Boron stress in grapevine: Current developments and future prospects. In Grapevine in a Changing Environment: A Molecular and Ecophysiological Perspective (pp. 202–222) HTML
O’Brien, J. A., Vega, A., Bouguyon, E., Krouk, G., Gojon, A., Coruzzi, G., & Gutiérrez, R. A. (2016). Nitrate Transport, Sensing, and Responses in Plants. Mol. Plant, 9(6), 837–56 HTML
Peña, E., Gutiérrez, M., Montecinos, A., Muñoz, M., Vargas, E., Acuña, I., Gutiérrez, R. A., & Rosales, I. M. (2016). First Report of Potato mop-top virus in Chile. Plant Dis., 100(6), 1250–1250 HTML
Pérez-Delgado, C. M., Moyano, T. C., García-Calderón, M., Canales, J., Gutiérrez, R. A., Márquez, A. J., & Betti, M. (2016). Use of transcriptomics and co-expression networks to analyze the interconnections between nitrogen assimilation and photorespiratory metabolism. J. Exp. Bot., 67(10), 3095–108 HTML
Poupin, M. J., Greve, M., Carmona, V., & Pinedo, I. (2016). A Complex Molecular Interplay of Auxin and Ethylene Signaling Pathways Is Involved in Arabidopsis Growth Promotion by Burkholderia phytofirmans PsJN. Front. Plant Sci., 7, 492 HTML
Rioja, T., Ceballos, R., Holuigue, L., & Vargas, R. (2016). Different population densities and continuous feeding by Oligonychus yothersi (McGregor) (Acari: Tetranychidae) affect the emissions of herbivore-induced plant volatiles on avocado ( Persea americana Mill. cv. Hass) shoots under semi-field conditions. Int. J. Acarol., 42(6), 310–318 HTML
Tapia-Valdebenito, D., Bravo Ramirez, L. A., Arce–Johnson, P., & Gutiérrez-Moraga, A. (2016). Salt tolerance traits in Deschampsia antarctica Desv. Antarct. Sci., 28(6), 462–472 HTML
Valenzuela, C. E., Acevedo-Acevedo, O., Miranda, G. S., Vergara-Barros, P., Holuigue, L., Figueroa, C. R., & Figueroa, P. M. (2016). Salt stress response triggers activation of the jasmonate signaling pathway leading to inhibition of cell elongation in Arabidopsis primary root. J. Exp. Bot., 67(14), 4209–20 HTML
Yazaki, J., Galli, M., Kim, A. Y., Nito, K., Aleman, F., Chang, K. N., Carvunis, A.-R., Quan, R., Nguyen, H., Song, L., Alvarez, J. M., Huang, S. C., Chen, H., Ramachandran, N., Altmann, S., Gutiérrez, R. A., Hill, D. E., … Ecker, J. R. (2016). Mapping transcription factor interactome networks using HaloTag protein arrays. Proc. Natl. Acad. Sci., 113(29), E4238–E4247 HTML
2015
Alvarez-Gerding, X., Cortés-Bullemore, R., Medina, C., Romero-Romero, J. L., Inostroza-Blancheteau, C., Aquea, F., & Arce-Johnson, P. (2015). Improved Salinity Tolerance in Carrizo Citrange Rootstock through Overexpression of Glyoxalase System Genes. Biomed Res. Int., 2015, 827951 HTML
Cavallini, E., Matus, J. T., Finezzo, L., Zenoni, S., Loyola, R., Guzzo, F., Schlechter, R., Ageorges, A., Arce-Johnson, P., & Tornielli, G. B. (2015). The phenylpropanoid pathway is controlled at different branches by a set of R2R3-MYB C2 repressors in grapevine. Plant Physiol., 167(4), 1448–70 HTML
Herrera-Vásquez, A., Carvallo, L., Blanco, F., Tobar, M., Villarroel-Candia, E., Vicente-Carbajosa, J., Salinas, P., & Holuigue, L. (2015). Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis. Plant Mol. Biol. Report., 33(3), 624–637 HTML
Meyer-Regueiro, C., Schlechter, R., Espinoza, C., Bisquertt, A., Aquea, F., & Arce-Johnson, P. (2016). Boron stress in grapevine: Current developments and future prospects. In Grapevine in a Changing Environment: A Molecular and Ecophysiological Perspective (pp. 202–222) HTML
Moraga, F., & Aquea, F. (2015). Composition of the SAGA complex in plants and its role in controlling gene expression in response to abiotic stresses. Front. Plant Sci., 6, 865 HTML
Pinedo, I., Ledger, T., Greve, M., & Poupin, M. J. (2015). Burkholderia phytofirmans PsJN induces long-term metabolic and transcriptional changes involved in Arabidopsis thaliana salt tolerance. Front. Plant Sci., 6(June), 466 HTML
Vega, A., Canessa, P., Hoppe, G., Retamal, I., Moyano, T. C., Canales, J., Gutiérrez, R. A., & Rubilar, J. (2015). Transcriptome analysis reveals regulatory networks underlying differential susceptibility to Botrytis cinerea in response to nitrogen availability in Solanum lycopersicum. Front. Plant Sci., 6, 911 HTML
Alvarez-Gerding X, Espinoza C, Inostroza-Blancheteau C, Arce-Johnson P (2015) Molecular and physiological changes in response to salt stress in Citrus macrophylla W plants overexpressing Arabidopsis CBF3/DREB1A. Plant Physiol Biochem 92: 71–80 NCBI
Herrera-Vasquez A, Salinas P, Holuigue L (2015) Salicylic acid and reactive oxygen species interplay in the transcriptional control of defense genes expression. Front Plant Sci 6: 171 NCBI
Mora-Ruiz MDR, Font-Verdera F, Diaz-Gil C, Urdiain M, Rodriguez-Valdecantos G, Gonzalez B, Orfila A, Rossello-Mora R (2015) Moderate halophilic bacteria colonizing the phylloplane of halophytes of the subfamily Salicornioideae (Amaranthaceae). Syst Appl Microbiol 38: 406–416 NCBI
Moyano TC, Vidal EA, Contreras-Lopez O, Gutierrez RA (2015) Constructing simple biological networks for understanding complex high-throughput data in plants. Methods Mol Biol 1284: 503–526 NCBI
Perez-Pantoja D, Leiva-Novoa P, Donoso RA, Little C, Godoy M, Pieper DH, Gonzalez B (2015) Hierarchy of Carbon Source Utilization in Soil Bacteria: Hegemonic Preference for Benzoate in Complex Aromatic Compound Mixtures Degraded by Cupriavidus pinatubonensis Strain JMP134. Appl Environ Microbiol 81: 3914–3924 NCBI
Riveras E, Alvarez JM, Vidal EA, Oses C, Vega A, Gutierrez RA (2015) Ca2+ is a second messenger in the nitrate signaling pathway of Arabidopsis thaliana. Plant Physiol 169: 1397–1404 NCBI
Vidal EA, Alvarez JM, Moyano TC, Gutierrez RA (2015) Transcriptional networks in the nitrate response of Arabidopsis thaliana. Curr Opin Plant Biol 27: 125–132 NCBI
Viver T, Cifuentes A, Diaz S, Rodriguez-Valdecantos G, Gonzalez B, Anton J, Rossello-Mora R (2015) Diversity of extremely halophilic cultivable prokaryotes in Mediterranean, Atlantic and Pacific solar salterns: Evidence that unexplored sites constitute sources of cultivable novelty. Syst Appl Microbiol 38: 266–275 NCBI
2014
Alvarez JM, Riveras E, Vidal EA, Gras DE, Contreras-Lopez O, Tamayo KP, Aceituno F, Gomez I, Ruffel S, Lejay L., Jordana, X., & Gutiérrez, R. A. (2014) Systems approach identifies TGA1 and TGA4 transcription factors as important regulatory components of the nitrate response of Arabidopsis thaliana roots. Plant J 80: 1–13 NCBI
Arenas-M A, Zehrmann A, Moreno S, Takenaka M, Jordana X (2014) The pentatricopeptide repeat protein MEF26 participates in RNA editing in mitochondrial cox3 and nad4 transcripts. Mitochondrion 19 Pt B: 126–134 NCBI
Canales J, Moyano TC, Villarroel E, Gutierrez RA (2014) Systems analysis of transcriptome data provides new hypotheses about Arabidopsis root response to nitrate treatments. Front Plant Sci 5: 22 NCBI
Inostroza-Blancheteau C, Reyes-Diaz M, Arellano A, Latsague M, Acevedo P, Loyola R, Arce-Johnson P, Alberdi M (2014) Effects of UV-B radiation on anatomical characteristics, phenolic compounds and gene expression of the phenylpropanoid pathway in highbush blueberry leaves. Plant Physiol Biochem 85: 85–95 NCBI
Kuhn N, Abello C, Godoy F, Delrot S, Arce-Johnson P (2014a) Differential behavior within a grapevine cluster: decreased ethylene-related gene expression dependent on auxin transport is correlated with low abscission of first developed berries. PLoS One 9: e111258 NCBI
Kuhn N, Guan L, Dai ZW, Wu B-H, Lauvergeat V, Gomes E, Li S-H, Godoy F, Arce-Johnson P, Delrot S (2014b) Berry ripening: recently heard through the grapevine. J Exp Bot 65: 4543–4559 NCBI
Lecourieux F, Kappel C, Lecourieux D, Serrano A, Torres E, Arce-Johnson P, Delrot S (2014) An update on sugar transport and signalling in grapevine. J Exp Bot 65: 821–832 NCBI
Vidal EA, Alvarez JM, Gutierrez RA (2014a) Nitrate regulation of AFB3 and NAC4 gene expression in Arabidopsis roots depends on NRT1.1 nitrate transport function. Plant Signal Behav 9: e28501 NCBI
Vidal EA, Moyano TC, Canales J, Gutierrez RA (2014b) Nitrogen control of developmental phase transitions in Arabidopsis thaliana. J Exp Bot 65: 5611–5618 NCBI